Sequence Similarity Clusters for the Entities in PDB 1PGR

Entity #1 | Chains: A,C,E,G
PROTEIN (GRANULOCYTE COLONY-STIMULATING FACTOR) protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 6463
95 % 5 6 4386
90 % 5 6 4408
70 % 8 9 3269
50 % 8 9 3195
40 % 8 9 3112
30 % 8 9 2923
Entity #2 | Chains: B,D,F,H
PROTEIN (G-CSF RECEPTOR) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 12716
95 % 2 2 12246
90 % 2 2 12058
70 % 2 2 11385
50 % 2 2 10186
40 % 2 2 9244
30 % 2 2 8052

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.