Sequence Similarity Clusters for the Entities in PDB 1PGO

Entity #1 | Chains: A
6-PHOSPHOGLUCONATE DEHYDROGENASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 16238
95 % 3 5 15081 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 6 8 5468
70 % 6 8 5346
50 % 15 19 1705
40 % 15 19 1689
30 % 15 20 1568

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures