Sequence Similarity Clusters for the Entities in PDB 1PGJ

Entity #1 | Chains: A,B
6-PHOSPHOGLUCONATE DEHYDROGENASE protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40997
95 % 1 1 34524 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 33008
70 % 1 1 29445
50 % 1 1 25135
40 % 1 1 22066
30 % 19 20 1541

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures