Sequence Similarity Clusters for the Entities in PDB 1PGJ

Entity #1 | Chains: A,B
6-PHOSPHOGLUCONATE DEHYDROGENASE protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32946
95 % 1 1 26723 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 25810
70 % 1 1 23416
50 % 1 1 20218
40 % 1 1 17988
30 % 19 20 1495

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures