Sequence Similarity Clusters for the Entities in PDB 1PGF

Entity #1 | Chains: A,B
PROSTAGLANDIN H2 SYNTHASE-1 protein, length: 576 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 29 968
95 % 30 31 1067 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 30 31 1098
70 % 30 31 1136
50 % 82 83 245
40 % 82 83 273
30 % 82 83 286

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures