Sequence Similarity Clusters for the Entities in PDB 1PGE

Entity #1 | Chains: A,B
PROSTAGLANDIN H2 SYNTHASE-1 protein, length: 576 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 26 930
95 % 24 31 1041 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 24 31 1068
70 % 24 31 1099
50 % 73 83 237
40 % 73 83 256
30 % 73 83 265

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures