Sequence Similarity Clusters for the Entities in PDB 1PG7

Entity #1 | Chains: H,I
humanized antibody D3H44 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 20577
95 % 3 3 17961
90 % 3 3 17573
70 % 1217 2232 2
50 % 2504 4607 1
40 % 2504 4607 1
30 % 2874 5422 1
Entity #2 | Chains: L,M
humanized antibody D3H44 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 20948
95 % 4 4 14176
90 % 375 695 3
70 % 1225 2274 1
50 % 2505 4607 1
40 % 2505 4607 1
30 % 2875 5422 1
Entity #3 | Chains: W,Y
murine antibody 6A6 Fab fragment protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40596
95 % 1 1 30874
90 % 19 45 385
70 % 1226 2274 1
50 % 2506 4607 1
40 % 2506 4607 1
30 % 2876 5422 1
Entity #4 | Chains: X,Z
murine antibody 6A6 Fab fragment protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39629
95 % 1 1 30324
90 % 1 1 29167
70 % 1218 2232 2
50 % 2507 4607 1
40 % 2507 4607 1
30 % 2877 5422 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.