Sequence Similarity Clusters for the Entities in PDB 1PG5

Entity #1 | Chains: A
Aspartate carbamoyltransferase protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 36801
95 % 1 2 28855
90 % 1 2 27845
70 % 1 2 25127
50 % 1 2 21553
40 % 54 78 252
30 % 99 141 137
Entity #2 | Chains: B
Aspartate carbamoyltransferase regulatory chain protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 43348
95 % 1 2 32799 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 31348
70 % 1 2 27954
50 % 1 2 23855
40 % 1 2 20984
30 % 1 2 17769

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures