Sequence Similarity Clusters for the Entities in PDB 1PG3

Entity #1 | Chains: A,B
acetyl-CoA synthetase protein, length: 652 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 4709
95 % 7 9 3683 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 7 9 3753
70 % 7 9 3680
50 % 10 14 1863
40 % 10 15 1780
30 % 94 137 247

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2D1S 1 A Luciferin 4-monooxygenase 7051 1.13.12.7 | Details
2 2D1T 1 A Luciferin 4-monooxygenase 7051 1.13.12.7 | Details
3 3NYQ 1 A Malonyl-CoA Ligase 1902
4 5WM2 1 A Salicylate-AMP ligase 1649596
5 3NYR 1 A Malonyl-CoA Ligase 1902
6 5BSR 1 A 4-coumarate--CoA ligase 2 4097 6.2.1.12 | Details
7 3C5E 1 A Acyl-coenzyme A synthetase ACSM2A, mitochondrial precursor Residues 32-577 9606 6.2.1.2 | Details
8 4RLQ 1 A, B Benzoate-coenzyme A ligase 1076
9 2D1R 1 A Luciferin 4-monooxygenase 7051 1.13.12.7 | Details
10 5JRH 1 A, B Acetyl-coenzyme A synthetase 28901 6.2.1.1 | Details
11 4ZJZ 1 A, B Benzoate-coenzyme A ligase 1076
12 4FUQ 1 A, B, C, D Malonyl CoA synthetase 1076 6.2.1 | Details
13 4RMN 1 A, B Benzoate-coenzyme A ligase 1076
14 5WM3 1 A Salicylate-AMP ligase 1649596
15 5BST 1 A 4-coumarate--CoA ligase 2 4097 6.2.1.12 | Details
16 5WM7 1 A Salicylate-AMP ligase 1649596
17 4RLF 1 A, B Benzoate-coenzyme A ligase 1076
18 5X8F 1 A, B, C, D 2-succinylbenzoate--CoA ligase UNP residues 2-486 1423 6.2.1.26 | Details
19 4RM2 1 A, B Benzoate-coenzyme A ligase 1076
20 5WM5 1 A Salicylate-AMP ligase 1649596
21 4EAT 1 A, B Benzoate-coenzyme A ligase 1076 6.2.1.25 | Details
22 5BSV 1 A 4-coumarate--CoA ligase 2 4097 6.2.1.12 | Details
23 3RIX 1 A Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
24 3R44 1 A fatty acyl CoA synthetase FADD13 (FATTY-ACYL-CoA SYNTHETASE) 1773 6.2.1 | Details
25 5IE2 1 A, B Oxalate--CoA ligase 3702 6.2.1.8 | Details
26 1PG4 1 A, B acetyl-CoA synthetase 28901 6.2.1.1 | Details
27 5BSU 1 A 4-coumarate--CoA ligase 2 4097 6.2.1.12 | Details
28 4RM3 1 A, B Benzoate-coenzyme A ligase 1076
29 3VNR 1 A NRPS adenylation protein CytC1 1931
30 5IE3 1 A, B Oxalate--CoA ligase 3702 6.2.1.8 | Details
31 5X8G 1 A, B, C, D 2-succinylbenzoate--CoA ligase UNP residues 2-486 1423 6.2.1.26 | Details
32 4GR5 1 A, B, C, D Non-ribosomal peptide synthetase 47763
33 3GPC 1 A, B Acyl-coenzyme A synthetase ACSM2A UNP residues 32-577 9606 6.2.1.2 | Details
34 5UPT 1 A Acyl-CoA synthetase PtmA2 58346
35 5WM4 1 A Salicylate-AMP ligase 1649596
36 4GXR 1 A Malonyl CoA synthetase, Benzoate-CoA ligase Chimeric protein UNP Q6ND88 residues 1-443,455-503 and UNP Q13WK3 473-483 36873 6.2.1 | Details
37 5WM6 1 A Salicylate-AMP ligase 1649596
38 3NI2 1 A 4-coumarate:CoA ligase 118781 6.2.1.12 | Details
39 3DAY 1 A Acyl-coenzyme A synthetase ACSM2A, mitochondrial precursor Residues 32-577 9606 6.2.1.2 | Details
40 5BUQ 1 A, B 2-succinylbenzoate--CoA ligase 1423 6.2.1.26 | Details
41 4FUT 1 A Malonyl CoA synthetase MatB 1076 6.2.1 | Details
42 5GXD 1 A AMP-dependent synthetase and ligase 215813 6.2.1 | Details
43 3CW9 1 A, B 4-chlorobenzoyl CoA ligase 206162 6.2.1.33 | Details
44 3O83 1 A, B Peptide arylation enzyme BasE 470 6.2.1 | Details
45 5UPS 1 A, B Acyl-CoA synthetase PtmA2 58346
46 3B7W 1 A Acyl-coenzyme A synthetase ACSM2A, mitochondrial precursor Residues 32-577 9606 6.2.1.2 | Details
47 5IFI 1 A, B, C Acetyl-coenzyme A synthetase 5207 6.2.1.1 | Details
48 3IVR 1 A, B Putative long-chain-fatty-acid CoA ligase 1076 6.2.1.3 | Details
49 5IE0 1 A, B Oxalate--CoA ligase 3702 6.2.1.8 | Details
50 2V7B 1 A, B BENZOATE-COENZYME A LIGASE BENZOATE RESIDUES 1-529 36873 6.2.1.25 | Details
51 5KYT 1 A, B Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
52 4D57 1 A APNA A1 1160
53 3FCE 1 A D-alanine--poly(phosphoribitol) ligase subunit 1 1396 6.2.1 | Details
54 4PZP 1 A D-alanine--poly(phosphoribitol) ligase subunit 1 1396 6.2.1 | Details
55 3IES 1 A Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
56 1T5H 1 X 4-chlorobenzoyl CoA ligase 206162 6.2.1.33 | Details
57 1AMU 1 A, B GRAMICIDIN SYNTHETASE 1 ADENYLATE FORMING DOMAIN, RESIDUES 1 - 556 PLUS A 7 RESIDUE C-TERMINAL TAG - SHHHHHH 1393 5.1.1.11 | Details
58 4D4I 1 A APNAA1 1160
59 3VNS 1 A NRPS adenylation protein CytC1 1931
60 3IER 1 A Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
61 3QYA 1 A Luciferase 293978 1.13.12.7 | Details
62 3ETC 1 A, B AMP-binding protein UNP residues 4-560 2214 6.2.1 | Details
63 4D56 1 A APNAA1 1160
64 2P2M 1 A, B Acetyl-coenzyme A synthetase 90371 6.2.1.1 | Details
65 3VNQ 1 A NRPS adenylation protein CytC1 1931
66 3O84 1 A, B Peptide arylation enzyme BasE 470 6.2.1 | Details
67 3U16 1 A, B Peptide arylation enzyme 470 6.2.1 | Details
68 4D4H 1 A APNAA1 1160
69 3IEP 1 A Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
70 3DHV 1 A D-alanine-poly(phosphoribitol) ligase 1396 6.2.1 | Details
71 2P2B 1 A, B Acetyl-coenzyme A synthetase 90371 6.2.1.1 | Details
72 3U17 1 A, B Peptide arylation enzyme 470 6.2.1 | Details
73 4GXQ 1 A, B, C Malonyl CoA synthetase, Benzoate-CoA ligase Chimeric protein UNP Q6ND88 residues 1-443,466-506 and UNP Q13WK3 473-497 36873 6.2.1 | Details
74 5BSW 1 A, B 4-coumarate--CoA ligase 2 4097 6.2.1.12 | Details
75 1LCI 1 A LUCIFERASE 7054 1.13.12.7 | Details
76 5E7Q 1 A, B acyl-CoA synthetase 58346
77 1T5D 1 X 4-chlorobenzoyl CoA ligase 206162 6.2.1.33 | Details
78 2P20 1 A, B Acetyl-coenzyme A synthetase 90371 6.2.1.1 | Details
79 4E5D 1 A Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
80 4D4G 1 A APNAA1 1160
81 1BA3 1 A LUCIFERASE 7054 1.13.12.7 | Details
82 5K85 1 A, B, C Acetyl-coenzyme A synthetase 5207 6.2.1.1 | Details
83 2D1Q 1 A Luciferin 4-monooxygenase 7051 1.13.12.7 | Details
84 5DWV 1 A Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
85 5U95 1 A, B, C, D 4-coumarate--CoA ligase 2 4097 6.2.1.12 | Details
86 3IPL 1 A, B, C 2-succinylbenzoate--CoA ligase 1280 6.2.1.26 | Details
87 1MDB 1 A 2,3-dihydroxybenzoate-AMP ligase 1423 6.3.2 | Details
88 2P2J 1 A, B Acetyl-coenzyme A synthetase 90371 6.2.1.1 | Details
89 3WVN 1 A, B Non-ribosomal peptide synthetase 1944 6.2.1 | Details
90 3CW8 1 X 4-chlorobenzoyl CoA ligase 206162 6.2.1.33 | Details
91 5U29 1 A, B, C Acetyl-coenzyme A synthetase 5207 6.2.1.1 | Details
92 3G7S 1 A, B Long-chain-fatty-acid--CoA ligase (FadD-1) 2234
93 5BSM 1 A, B 4-coumarate--CoA ligase 2 4097 6.2.1.12 | Details
94 1PG3 1 A, B acetyl-CoA synthetase 28901 6.2.1.1 | Details
95 5KEI 1 A 2,3-dihydroxybenzoate-AMP ligase 1772 6.3.2 | Details
96 1RY2 1 A acetyl-coenzyme A synthetase 1 4932 6.2.1.1 | Details
97 3E7W 1 A D-alanine--poly(phosphoribitol) ligase subunit 1 1423 6.2.1 | Details
98 5K8F 1 A, B, C Acetyl-coenzyme A synthetase 5207 6.2.1.1 | Details
99 3EQ6 1 A, B Acyl-coenzyme A synthetase ACSM2A UNP residues 32-577 9606 6.2.1.2 | Details
100 1V25 1 A, B long-chain-fatty-acid-CoA synthetase 274 6.2.1.3 | Details
101 5JJP 1 A, B, C, D Nonribosomal peptide synthase 1321967
102 5VPV 1 A, B, C Acetyl-coenzyme A synthetase 5207 6.2.1.1 | Details
103 2P2Q 1 A, B Acetyl-coenzyme A synthetase 90371 6.2.1.1 | Details
104 3A9U 1 A 4-coumarate--CoA ligase 118781 6.2.1.12 | Details
105 5DV9 1 A Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
106 4G37 1 A, B Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
107 5N9X 1 A, B Adenylation domain 1931
108 2VZE 1 A, B, C ACYL-COENZYME A SYNTHETASE ACSM2A, MITOCHONDRIAL RESIDUES 32-577 9606 6.2.1.2 | Details
109 4WV3 1 A, B Anthranilate-CoA ligase 41
110 5U2A 1 A AMP-dependent synthetase and ligase 36855
111 5N9W 1 A, B Adenylation domain 1931
112 3E7X 1 A D-alanine--poly(phosphoribitol) ligase subunit 1 1423 6.2.1 | Details
113 5KYV 1 A, B Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
114 2QVZ 1 X 4-Chlorobenzoate CoA Ligase/Synthetase 206162 6.2.1.33 | Details
115 2QW0 1 X 4-Chlorobenzoate CoA Ligase 206162 6.2.1.33 | Details
116 2P2F 1 A, B Acetyl-coenzyme A synthetase 90371 6.2.1.1 | Details
117 3A9V 1 A 4-coumarate--CoA ligase 118781 6.2.1.12 | Details
118 1MDF 1 A 2,3-dihydroxybenzoate-AMP ligase 1423 6.3.2 | Details
119 3L8C 1 A, B D-alanine--poly(phosphoribitol) ligase subunit 1 1314 6.1.1.13 | Details
120 1V26 1 A, B long-chain-fatty-acid-CoA synthetase 274 6.2.1.3 | Details
121 4G36 1 A, B Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
122 5BUS 1 A, B 2-succinylbenzoate--CoA ligase 1423 6.2.1.26 | Details
123 3FCC 1 A D-alanine--poly(phosphoribitol) ligase subunit 1 1396 6.2.1 | Details
124 1ULT 1 A, B long chain fatty acid-CoA ligase 274 6.2.1.3 | Details
125 5UPQ 1 A, B Acyl-CoA synthetase PtmA2 58346
126 2QVX 1 X 4-Chlorobenzoate CoA Ligase 206162 6.2.1.33 | Details
127 3DLP 1 X 4-Chlorobenzoate CoA Ligase/Synthetase 206162 6.2.1.33 | Details
128 5GTD 1 A, B 2-succinylbenzoate--CoA ligase 1423 6.2.1.26 | Details
129 2QVY 1 X 4-Chlorobenzoate CoA Ligase 206162 6.2.1.33 | Details
130 3O82 1 A, B Peptide arylation enzyme BasE 470 6.2.1 | Details
131 3LGX 1 A, B, C, D D-alanine--poly(phosphoribitol) ligase subunit 1 1314 6.1.1.13 | Details
132 4M46 1 A Luciferase 293978 1.13.12.7 | Details
133 5JJQ 1 A, B, C, D AMP-dependent synthetase and ligase 1265536
134 2WD9 1 A, B, C ACYL-COENZYME A SYNTHETASE ACSM2A, MITOCHONDRIAL RESIDUES 32-576 9606 6.2.1.2 | Details
135 5BUR 1 A, B 2-succinylbenzoate--CoA ligase 1423 6.2.1.26 | Details
136 5WYS 1 A Luciferin 4-monooxygenase 7054 1.13.12.7 | Details
137 1MD9 1 A 2,3-dihydroxybenzoate-AMP ligase 1423 6.3.2 | Details