Sequence Similarity Clusters for the Entities in PDB 1PFZ

Entity #1 | Chains: A,B,C,D
PROPLASMEPSIN II protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14761
95 % 1 2 13962 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 2 13744
70 % 1 2 12931
50 % 2 4 6791
40 % 2 4 6320
30 % 2 7 3452

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures