Sequence Similarity Clusters for the Entities in PDB 1PFZ

Entity #1 | Chains: A,B,C,D
PROPLASMEPSIN II protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15037
95 % 1 2 14188 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 2 13968
70 % 1 2 13133
50 % 2 4 6895
40 % 2 4 6421
30 % 565 737 31

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures