Sequence Similarity Clusters for the Entities in PDB 1PFZ

Entity #1 | Chains: A,B,C,D
PROPLASMEPSIN II protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15276
95 % 1 2 14396 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 2 14170
70 % 1 2 13310
50 % 2 4 6992
40 % 2 4 6504
30 % 565 737 31

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures