Sequence Similarity Clusters for the Entities in PDB 1PFZ

Entity #1 | Chains: A,B,C,D
PROPLASMEPSIN II protein, length: 380 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14563
95 % 1 2 13786 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 2 13575
70 % 1 2 12783
50 % 2 4 6707
40 % 2 4 6243
30 % 2 7 3415

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.