Sequence Similarity Clusters for the Entities in PDB 1PFX

Entity #1 | Chains: C
FACTOR IXA protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 39862
95 % 1 2 30646
90 % 1 2 29556
70 % 22 23 2606
50 % 22 23 2580
40 % 1636 1719 4
30 % 1772 1869 6
Entity #2 | Chains: L
FACTOR IXA protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 44904
95 % 1 2 33834
90 % 1 2 32333
70 % 1 2 28825
50 % 72 74 764
40 % 72 74 801
30 % 72 74 791

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures