Sequence Similarity Clusters for the Entities in PDB 1PFP

Entity #1 | Chains: A
Protegrin 3 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69138
95 % 2 5 14943 Flexibility: High
Max RMSD: 26.6, Avg RMSD: 17.8
PDBFlex
90 % 2 5 14666
70 % 2 5 13728
50 % 3 6 9144
40 % 3 6 8364
30 % 3 6 7370

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.