Sequence Similarity Clusters for the Entities in PDB 1PFP

Entity #1 | Chains: A
Protegrin 3 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54866
95 % 2 5 15851 Flexibility: High
Max RMSD: 26.6, Avg RMSD: 17.8
PDBFlex
90 % 2 5 15511
70 % 2 5 14504
50 % 3 6 9585
40 % 3 6 8678
30 % 3 6 7494

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures