Sequence Similarity Clusters for the Entities in PDB 1PFP

Entity #1 | Chains: A
Protegrin 3 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 71322
95 % 2 5 15474 Flexibility: High
Max RMSD: 26.6, Avg RMSD: 17.8
PDBFlex
90 % 2 5 15189
70 % 2 5 14215
50 % 3 6 9474
40 % 3 6 8659
30 % 3 6 7619

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures