Sequence Similarity Clusters for the Entities in PDB 1PFO

Entity #1 | Chains: A
PERFRINGOLYSIN O protein, length: 500 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 9846
95 % 1 7 5209 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.5
PDBFlex
90 % 1 7 5227
70 % 1 8 4424
50 % 1 8 4257
40 % 3 20 1973
30 % 3 20 1907

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.