Sequence Similarity Clusters for the Entities in PDB 1PFM

Entity #1 | Chains: A,B,C,D
PF4-M2 CHIMERA protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 9946
95 % 9 10 1269
90 % 9 10 1300
70 % 10 11 1196
50 % 27 33 586
40 % 27 33 620
30 % 47 53 444

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures