Sequence Similarity Clusters for the Entities in PDB 1PFI

Entity #1 | Chains: A,B
MAJOR COAT PROTEIN OF PF1 VIRUS protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 14 3021
95 % 10 14 3770
90 % 10 14 3811
70 % 10 14 3765
50 % 10 14 3680
40 % 10 14 3540
30 % 10 14 3311
Entity #2 | Chains: C,D
DNA (5'-D(P*C)-3') dna, length: 1 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.