Sequence Similarity Clusters for the Entities in PDB 1PF9

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N
groEL protein protein, length: 524 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 21 51
95 % 18 42 10
90 % 18 42 11
70 % 18 42 19
50 % 24 49 15
40 % 24 49 19
30 % 24 49 28
Entity #2 | Chains: O,P,Q,R,S,T,U
groES protein protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 14 197
95 % 7 14 276
90 % 7 14 288
70 % 7 14 315
50 % 12 20 217
40 % 12 20 247
30 % 12 20 258

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.