Sequence Similarity Clusters for the Entities in PDB 1PEM

Entity #1 | Chains: A
Ribonucleoside-diphosphate reductase 2 alpha chain protein, length: 714 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 12336
95 % 3 5 11840 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 3 5 11675
70 % 3 5 11049
50 % 3 5 10377
40 % 5 8 6442
30 % 5 8 5522

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1PEQ 1 A Ribonucleoside-diphosphate reductase 2 alpha chain 90371 1.17.4.1 | Details
2 1PEO 1 A Ribonucleoside-diphosphate reductase 2 alpha chain 90371 1.17.4.1 | Details
3 1PEM 1 A Ribonucleoside-diphosphate reductase 2 alpha chain 90371 1.17.4.1 | Details
4 1PEU 1 A Ribonucleoside-diphosphate reductase 2 alpha chain 90371 1.17.4.1 | Details
5 2BQ1 1 E, F RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 ALPHA SUBUNIT 90371 1.17.4.1 | Details