Sequence Similarity Clusters for the Entities in PDB 1PEM

Entity #1 | Chains: A
Ribonucleoside-diphosphate reductase 2 alpha chain protein, length: 714 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 12104
95 % 3 5 11645 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 3 5 11487
70 % 3 5 10844
50 % 3 5 10188
40 % 5 8 6325
30 % 5 8 5430

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures