Sequence Similarity Clusters for the Entities in PDB 1PED

Entity #1 | Chains: A,B,C,D
NADP-DEPENDENT ALCOHOL DEHYDROGENASE protein, length: 351 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 8293
95 % 3 4 3998 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 3 4 4037
70 % 9 13 1161
50 % 9 13 1198
40 % 9 13 1214
30 % 9 13 1187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.