Sequence Similarity Clusters for the Entities in PDB 1PDW

Entity #1 | Chains: A,B,C,D,E,F,G,H
DJ-1 protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 22 1014
95 % 46 48 745 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 46 48 778
70 % 46 48 819
50 % 47 49 842
40 % 50 52 788
30 % 54 56 555

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.