Sequence Similarity Clusters for the Entities in PDB 1PDU

Entity #1 | Chains: A,B
nuclear hormone receptor HR38 protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38599
95 % 1 1 29777 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 28734
70 % 1 1 25906
50 % 9 19 1370
40 % 9 19 1378
30 % 580 983 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.