Sequence Similarity Clusters for the Entities in PDB 1PDR

Entity #1 | Chains: A
HUMAN DISCS LARGE PROTEIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51500
95 % 1 1 42586
90 % 1 1 40528
70 % 14 16 1445
50 % 14 16 1490
40 % 134 226 144
30 % 196 335 112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5OII 1 A, B Disks large homolog 4 PDZ domain 9606
2 5OIH 1 A Disks large homolog 4 PDZ domain 9606
3 3I4W 1 A, B, C, D Disks large homolog 4 Third PDZ domain 9606
4 3K82 1 A Disks large homolog 4 Third PDZ domain 9606
5 2HE2 1 A, B Discs large homolog 2 9606
6 5OI4 1 A, B, C, D Disks large homolog 4 PDZ domain, UNP Residues 302-403 9606
7 3JXT 1 A, B Disks large homolog 3 Third PDZ domain: UNP residues 393-493 10116
8 5MZ7 1 A, B, C, D Disks large homolog 4 10116
9 5OHW 1 A, B, C, D Disks large homolog 4 PDZ domain 9606
10 5OIB 1 A, B, C, D, E, F Disks large homolog 4 PDZ domain 9606
11 5OIG 1 A Disks large homolog 4 PDZ domain 9606
12 5OIJ 1 A, B Disks large homolog 4 PDZ domain 9606
13 5OI6 1 A, B, C, D Disks large homolog 4 PDZ domain 9606
14 1PDR 1 A HUMAN DISCS LARGE PROTEIN THE THIRD PDZ DOMAIN OF THE HUMAN HOMOLOGUE OF DISCS LARGE PROTEIN PDZ3 DOMAIN, DHR3 DOMAIN 9606
15 2I0I 1 A, B, C Disks large homolog 1 PDZ3 10116
16 5W72 1 A Disks large homolog 4 10116