Sequence Similarity Clusters for the Entities in PDB 1PDR

Entity #1 | Chains: A
HUMAN DISCS LARGE PROTEIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72042
95 % 1 1 49650
90 % 1 1 47024
70 % 6 7 4630
50 % 6 7 4436
40 % 115 194 160
30 % 178 308 111

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3I4W 1 A, B, C, D Disks large homolog 4 Third PDZ domain 9606
2 3K82 1 A Disks large homolog 4 Third PDZ domain 9606
3 2HE2 1 A, B Discs large homolog 2 9606
4 3JXT 1 A, B Disks large homolog 3 Third PDZ domain: UNP residues 393-493 10116
5 5MZ7 1 A, B, C, D Disks large homolog 4 10116
6 1PDR 1 A HUMAN DISCS LARGE PROTEIN THE THIRD PDZ DOMAIN OF THE HUMAN HOMOLOGUE OF DISCS LARGE PROTEIN PDZ3 DOMAIN, DHR3 DOMAIN 9606
7 5W72 1 A Disks large homolog 4 10116