Sequence Similarity Clusters for the Entities in PDB 1PDQ

Entity #1 | Chains: A
Polycomb protein protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58079
95 % 1 1 47541
90 % 1 1 45154
70 % 1 1 39655
50 % 5 8 8383
40 % 5 9 6647
30 % 5 9 5665
Entity #2 | Chains: B
Histone H3.3 protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1PDQ 1 A Polycomb protein residues 15-77 7227