Sequence Similarity Clusters for the Entities in PDB 1PDQ

Entity #1 | Chains: A
Polycomb protein protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70979
95 % 1 1 49249
90 % 1 1 46753
70 % 1 1 41089
50 % 2 5 12168
40 % 2 5 11029
30 % 2 6 8656
Entity #2 | Chains: B
Histone H3.3 protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.