Sequence Similarity Clusters for the Entities in PDB 1PDQ

Entity #1 | Chains: A
Polycomb protein protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72859
95 % 1 1 50510
90 % 1 1 47898
70 % 1 1 41995
50 % 5 8 8565
40 % 5 8 7847
30 % 5 9 6010
Entity #2 | Chains: B
Histone H3.3 protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures