Sequence Similarity Clusters for the Entities in PDB 1PDP

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Baseplate structural protein Gp9 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 365
95 % 7 7 521
90 % 7 7 558
70 % 7 7 598
50 % 7 7 639
40 % 7 7 669
30 % 7 7 673

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.