Sequence Similarity Clusters for the Entities in PDB 1PDP

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Baseplate structural protein Gp9 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 430
95 % 7 7 598
90 % 7 7 626
70 % 7 7 668
50 % 7 7 712
40 % 7 7 742
30 % 7 7 737

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures