Sequence Similarity Clusters for the Entities in PDB 1PDP

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Baseplate structural protein Gp9 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 435
95 % 7 7 600
90 % 7 7 630
70 % 7 7 675
50 % 7 7 723
40 % 7 7 749
30 % 7 7 746

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures