Sequence Similarity Clusters for the Entities in PDB 1PDO

Entity #1 | Chains: A
MANNOSE PERMEASE protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 11123
95 % 1 5 8249
90 % 1 5 8188
70 % 1 5 7920
50 % 1 5 7297
40 % 1 5 6775
30 % 1 8 1420

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures