Sequence Similarity Clusters for the Entities in PDB 1PDM

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Baseplate structural protein Gp8 protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 559
95 % 8 8 797
90 % 8 8 840
70 % 8 8 890
50 % 8 8 935
40 % 8 8 960
30 % 8 8 954

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.