Sequence Similarity Clusters for the Entities in PDB 1PDK

Entity #1 | Chains: A
PROTEIN (CHAPERONE PROTEIN PAPD) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 11 3305
95 % 10 15 2770
90 % 10 15 2813
70 % 10 15 2784
50 % 10 15 2748
40 % 10 15 2703
30 % 26 42 587
Entity #2 | Chains: B
PROTEIN (PROTEIN PAPK) protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63341
95 % 1 1 43878
90 % 1 1 41661
70 % 1 1 36668
50 % 1 1 31239
40 % 1 1 27560
30 % 1 1 23370

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.