Sequence Similarity Clusters for the Entities in PDB 1PDK

Entity #1 | Chains: A
PROTEIN (CHAPERONE PROTEIN PAPD) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 11 3103
95 % 10 15 2594
90 % 10 15 2641
70 % 10 15 2619
50 % 10 15 2579
40 % 10 15 2550
30 % 25 41 558
Entity #2 | Chains: B
PROTEIN (PROTEIN PAPK) protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59756
95 % 1 1 41320
90 % 1 1 39314
70 % 1 1 34741
50 % 1 1 29700
40 % 1 1 26217
30 % 1 1 22215

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.