Sequence Similarity Clusters for the Entities in PDB 1PDF

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Baseplate structural protein Gp11 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 645
95 % 5 5 877
90 % 5 5 912
70 % 5 5 940
50 % 5 5 973
40 % 5 5 1003
30 % 5 5 987

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures