Sequence Similarity Clusters for the Entities in PDB 1PDF

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Baseplate structural protein Gp11 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 608
95 % 5 5 826
90 % 5 5 856
70 % 5 5 890
50 % 5 5 935
40 % 5 5 962
30 % 5 5 938

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.