Sequence Similarity Clusters for the Entities in PDB 1PDF

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Baseplate structural protein Gp11 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 633
95 % 5 5 857
90 % 5 5 890
70 % 5 5 918
50 % 5 5 963
40 % 5 5 987
30 % 5 5 964

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures