Sequence Similarity Clusters for the Entities in PDB 1PDB

Entity #1 | Chains: A
Dihydrofolate reductase protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 53 57 493
95 % 71 75 484 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 71 75 520
70 % 84 89 428
50 % 84 89 506
40 % 84 89 548
30 % 290 342 106

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.