Sequence Similarity Clusters for the Entities in PDB 1PD7

Entity #1 | Chains: A
Sin3b protein protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 47412
95 % 1 2 35416
90 % 1 2 33838
70 % 1 2 30113
50 % 4 6 10897
40 % 4 6 9886
30 % 4 6 8608
Entity #2 | Chains: B
Mad1 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74277
95 % 1 1 51914
90 % 1 1 49276
70 % 1 1 43169
50 % 1 1 36859
40 % 1 1 32531
30 % 1 1 27628

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.