Sequence Similarity Clusters for the Entities in PDB 1PD7

Entity #1 | Chains: A
Sin3b protein protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46870
95 % 1 2 35014
90 % 1 2 33472
70 % 1 2 29847
50 % 4 6 10723
40 % 4 6 9730
30 % 4 6 8469
Entity #2 | Chains: B
Mad1 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73280
95 % 1 1 51146
90 % 1 1 48562
70 % 1 1 42663
50 % 1 1 36510
40 % 1 1 32242
30 % 1 1 27388

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.