Sequence Similarity Clusters for the Entities in PDB 1PD7

Entity #1 | Chains: A
Sin3b protein protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 49402
95 % 1 2 36836
90 % 1 2 35145
70 % 1 2 31211
50 % 4 6 11350
40 % 4 6 10280
30 % 4 6 8957
Entity #2 | Chains: B
Mad1 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 77185
95 % 1 1 53819
90 % 1 1 50994
70 % 1 1 44600
50 % 1 1 38053
40 % 1 1 33579
30 % 1 1 28518

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures