Sequence Similarity Clusters for the Entities in PDB 1PD7

Entity #1 | Chains: A
Sin3b protein protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48009
95 % 1 2 35856
90 % 1 2 34245
70 % 1 2 30443
50 % 4 6 11017
40 % 4 6 9993
30 % 4 6 8710
Entity #2 | Chains: B
Mad1 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75166
95 % 1 1 52497
90 % 1 1 49798
70 % 1 1 43586
50 % 1 1 37211
40 % 1 1 32839
30 % 1 1 27899

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.