Sequence Similarity Clusters for the Entities in PDB 1PD5

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Chloramphenicol acetyltransferase protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 746
95 % 2 5 1020 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 2 5 1051
70 % 2 5 1093
50 % 2 5 1141
40 % 8 11 1042
30 % 8 11 1030

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures