Sequence Similarity Clusters for the Entities in PDB 1PD5

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Chloramphenicol acetyltransferase protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 741
95 % 2 5 1009 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 2 5 1038
70 % 2 5 1080
50 % 2 5 1127
40 % 8 11 1032
30 % 8 11 1013

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures