Sequence Similarity Clusters for the Entities in PDB 1PD3

Entity #1 | Chains: A,B
Nonstructural protein NS2 protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49763
95 % 1 1 37132 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 35441
70 % 1 1 31484
50 % 1 1 26894
40 % 1 1 23739
30 % 1 1 20136

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures