Sequence Similarity Clusters for the Entities in PDB 1PD2

Entity #1 | Chains: 1,2
HEMATOPOIETIC PROSTAGLANDIN D SYNTHASE protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41429
95 % 1 1 31471 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 30104
70 % 21 22 672
50 % 21 22 720
40 % 21 22 756
30 % 178 254 46

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.