Sequence Similarity Clusters for the Entities in PDB 1PD0

Entity #1 | Chains: A
Protein transport protein Sec24 protein, length: 810 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 23768
95 % 3 3 20274
90 % 3 3 19721
70 % 3 3 18189
50 % 3 3 15866
40 % 3 3 14183
30 % 6 15 3084
Entity #2 | Chains: B
COPII-binding peptide of the integral membrane protein SED5 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.