Sequence Similarity Clusters for the Entities in PDB 1PCX

Entity #1 | Chains: A
Protein transport protein Sec24 protein, length: 810 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27023
95 % 1 3 23751
90 % 1 3 22989
70 % 1 3 20918
50 % 1 3 17994
40 % 1 3 15914
30 % 9 26 2122
Entity #2 | Chains: B
COPII-binding peptide of the protein transport protein BET1 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures