Sequence Similarity Clusters for the Entities in PDB 1PCR

Entity #1 | Chains: L
PHOTOSYNTHETIC REACTION CENTER protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 68 439
95 % 40 97 355
90 % 40 97 379
70 % 40 97 415
50 % 57 129 356
40 % 57 129 380
30 % 57 129 379
Entity #2 | Chains: M
PHOTOSYNTHETIC REACTION CENTER protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 62 490
95 % 40 97 354
90 % 40 97 378
70 % 40 97 413
50 % 57 129 355
40 % 57 129 379
30 % 57 129 378
Entity #3 | Chains: H
PHOTOSYNTHETIC REACTION CENTER protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 96 259
95 % 40 97 356 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.6
PDBFlex
90 % 40 97 380
70 % 40 97 416
50 % 40 97 496
40 % 57 129 381
30 % 57 129 380

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.