Sequence Similarity Clusters for the Entities in PDB 1PCQ

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N
groEL protein protein, length: 524 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 21 64
95 % 13 43 13 Flexibility: Medium
Max RMSD: 15.0, Avg RMSD: 5.5
PDBFlex
90 % 13 43 14
70 % 13 43 22
50 % 17 50 17
40 % 17 50 29
30 % 17 50 46
Entity #2 | Chains: O,P,Q,R,S,T,U
groES protein protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 14 231
95 % 2 14 325 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.2
PDBFlex
90 % 2 14 343
70 % 2 14 379
50 % 5 20 278
40 % 5 20 295
30 % 5 20 302

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.