Sequence Similarity Clusters for the Entities in PDB 1PCF

Entity #1 | Chains: A,B,C,D,E,F,G,H
TRANSCRIPTIONAL COACTIVATOR PC4 protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 5659
95 % 1 4 5081 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 1 4 5094
70 % 1 4 4971
50 % 1 4 4752
40 % 1 4 4512
30 % 1 4 4137

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures