Sequence Similarity Clusters for the Entities in PDB 1PC8

Entity #1 | Chains: A
Himalayan mistletoe ribosome-inactivating protein protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26601
95 % 3 3 22206 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 3 21562
70 % 17 17 3641
50 % 17 17 3556
40 % 77 77 616
30 % 206 207 210
Entity #2 | Chains: B
Himalayan mistletoe ribosome-inactivating protein protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26438
95 % 3 3 22084 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 17 17 3702
70 % 17 17 3638
50 % 25 25 2166
40 % 47 47 1147
30 % 47 47 1127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.