Sequence Similarity Clusters for the Entities in PDB 1PC8

Entity #1 | Chains: A
Himalayan mistletoe ribosome-inactivating protein protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27078
95 % 3 3 22632 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 3 21966
70 % 17 17 3706
50 % 17 17 3612
40 % 77 77 625
30 % 207 208 213
Entity #2 | Chains: B
Himalayan mistletoe ribosome-inactivating protein protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26913
95 % 3 3 22511 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 17 17 3751
70 % 17 17 3703
50 % 25 25 2187
40 % 47 47 1160
30 % 47 47 1140

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.