Sequence Similarity Clusters for the Entities in PDB 1PC8

Entity #1 | Chains: A
Himalayan mistletoe ribosome-inactivating protein protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27856
95 % 3 3 23234 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 3 22525
70 % 17 17 3816
50 % 17 17 3709
40 % 79 79 624
30 % 209 210 214
Entity #2 | Chains: B
Himalayan mistletoe ribosome-inactivating protein protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27687
95 % 3 3 23106 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 17 17 3872
70 % 17 17 3812
50 % 25 25 2265
40 % 47 47 1190
30 % 47 47 1172

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures