Sequence Similarity Clusters for the Entities in PDB 1PBH

Entity #1 | Chains: A
PROCATHEPSIN B protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25119
95 % 2 3 22188 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 2.4
PDBFlex
90 % 2 3 21505
70 % 3 4 13099
50 % 4 5 6926
40 % 9 10 3457
30 % 9 10 3110

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures