Sequence Similarity Clusters for the Entities in PDB 1PBG

Entity #1 | Chains: A,B
6-PHOSPHO-BETA-D-GALACTOSIDASE protein, length: 468 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17408
95 % 1 4 10185 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 4 10061
70 % 1 4 9549
50 % 1 4 8648
40 % 1 4 7929
30 % 161 231 108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.