Sequence Similarity Clusters for the Entities in PDB 1PBG

Entity #1 | Chains: A,B
6-PHOSPHO-BETA-D-GALACTOSIDASE protein, length: 468 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17770
95 % 1 4 10360 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 4 10235
70 % 1 4 9712
50 % 1 4 8794
40 % 1 4 8065
30 % 162 232 109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures