Sequence Similarity Clusters for the Entities in PDB 1PB7

Entity #1 | Chains: A
N-methyl-D-aspartate Receptor Subunit 1 protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 22 1782
95 % 1 34 1451 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.4
PDBFlex
90 % 1 34 1475
70 % 1 34 1473
50 % 1 34 1535
40 % 1 34 1548
30 % 1 72 693

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures