Sequence Similarity Clusters for the Entities in PDB 1PB0

Entity #1 | Chains: A,B,C
Hypothetical protein ycdX protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 17226
95 % 2 3 15971 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 3 15642
70 % 2 3 14628
50 % 2 3 12896
40 % 2 3 11565
30 % 2 3 9821

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures