Sequence Similarity Clusters for the Entities in PDB 1PB0

Entity #1 | Chains: A,B,C
Hypothetical protein ycdX protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15810
95 % 2 3 14800 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 3 14563
70 % 2 3 13671
50 % 2 3 12140
40 % 2 3 10992
30 % 2 3 9559

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures