Sequence Similarity Clusters for the Entities in PDB 1PAU

Entity #1 | Chains: A
APOPAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 37 706
95 % 35 40 868
90 % 35 40 902
70 % 35 40 925
50 % 35 41 934
40 % 40 48 703
30 % 40 48 700
Entity #2 | Chains: B
APOPAIN protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 36 665
95 % 33 39 872
90 % 35 42 795
70 % 35 42 833
50 % 46 66 417
40 % 46 67 442
30 % 58 83 305
Entity #3 | Chains: C
ACE-ASP-GLU-VAL-ASJ protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.