Sequence Similarity Clusters for the Entities in PDB 1PAU

Entity #1 | Chains: A
APOPAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 37 714
95 % 35 40 879
90 % 35 40 913
70 % 35 40 939
50 % 35 41 948
40 % 40 48 712
30 % 40 48 704
Entity #2 | Chains: B
APOPAIN protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 36 674
95 % 33 39 883
90 % 35 42 805
70 % 35 42 848
50 % 46 66 426
40 % 46 67 450
30 % 58 83 315
Entity #3 | Chains: C
ACE-ASP-GLU-VAL-ASJ protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.