Sequence Similarity Clusters for the Entities in PDB 1PAU

Entity #1 | Chains: A
APOPAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 37 738
95 % 35 40 899 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 35 40 932
70 % 35 40 958
50 % 35 41 974
40 % 40 48 743
30 % 40 48 735
Entity #2 | Chains: B
APOPAIN protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 36 696
95 % 33 39 902
90 % 35 42 827
70 % 35 42 862
50 % 46 66 438
40 % 46 67 461
30 % 58 83 321
Entity #3 | Chains: C
ACE-ASP-GLU-VAL-ASJ protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.