Sequence Similarity Clusters for the Entities in PDB 1PAG

Entity #1 | Chains: A,B
POKEWEED ANTIVIRAL PROTEIN protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 5878
95 % 6 6 6108 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 6 6 6105
70 % 18 18 2483
50 % 18 18 2460
40 % 19 19 2338
30 % 188 212 229

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures