Sequence Similarity Clusters for the Entities in PDB 1PAG

Entity #1 | Chains: A,B
POKEWEED ANTIVIRAL PROTEIN protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 5008
95 % 6 6 5729 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 6 6 5743
70 % 18 18 2330
50 % 18 18 2310
40 % 19 19 2205
30 % 186 210 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures