Sequence Similarity Clusters for the Entities in PDB 1PAF

Entity #1 | Chains: A,B
POKEWEED ANTIVIRAL PROTEIN protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 4846
95 % 5 6 5561 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 5 6 5571
70 % 17 18 2273
50 % 17 18 2254
40 % 18 19 2155
30 % 155 207 209

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.