Sequence Similarity Clusters for the Entities in PDB 1PAF

Entity #1 | Chains: A,B
POKEWEED ANTIVIRAL PROTEIN protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 5844
95 % 5 6 6074
90 % 5 6 6072
70 % 17 18 2473
50 % 17 18 2448
40 % 18 19 2325
30 % 157 212 231

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures