Sequence Similarity Clusters for the Entities in PDB 1PAF

Entity #1 | Chains: A,B
POKEWEED ANTIVIRAL PROTEIN protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 5044
95 % 5 6 5772
90 % 5 6 5786
70 % 17 18 2349
50 % 17 18 2330
40 % 18 19 2226
30 % 156 210 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures