Sequence Similarity Clusters for the Entities in PDB 1PAF

Entity #1 | Chains: A,B
POKEWEED ANTIVIRAL PROTEIN protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 4925
95 % 5 6 5647 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 6 5658
70 % 17 18 2291
50 % 17 18 2275
40 % 18 19 2176
30 % 156 208 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.