Sequence Similarity Clusters for the Entities in PDB 1PA9

Entity #1 | Chains: A
Protein-tyrosine phosphatase yopH protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 3864
95 % 16 23 2041 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 16 23 2088
70 % 16 23 2091
50 % 16 23 2079
40 % 16 23 2078
30 % 16 23 2004

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.