Sequence Similarity Clusters for the Entities in PDB 1PA9

Entity #1 | Chains: A
Protein-tyrosine phosphatase yopH protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 3944
95 % 16 23 2069 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 16 23 2117
70 % 16 23 2122
50 % 16 23 2115
40 % 16 23 2112
30 % 16 23 2029

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures