Sequence Similarity Clusters for the Entities in PDB 1PA6

Entity #1 | Chains: D
5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*AP*GP*G)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: G,H
5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
Telomere-binding protein alpha subunit protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 15 3471
95 % 12 15 4250
90 % 12 15 4280
70 % 12 15 4208
50 % 12 15 4057
40 % 12 15 3882
30 % 12 15 3595
Entity #4 | Chains: B
Telomere-binding protein beta subunit protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 11 5631
95 % 9 11 6300
90 % 9 11 6278
70 % 9 11 6139
50 % 9 11 5743
40 % 9 11 5374
30 % 9 11 4823

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.