Sequence Similarity Clusters for the Entities in PDB 1P9M

Entity #1 | Chains: A
Interleukin-6 receptor beta chain protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36247
95 % 2 2 28446
90 % 2 2 27462
70 % 2 2 24807
50 % 2 2 21292
40 % 2 2 18804
30 % 2 2 16003
Entity #2 | Chains: B
Interleukin-6 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 10 4308
95 % 9 11 4409 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.4
PDBFlex
90 % 9 11 4432
70 % 9 11 4367
50 % 9 11 4199
40 % 9 12 3784
30 % 9 12 3521
Entity #3 | Chains: C
Interleukin-6 receptor alpha chain protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61089
95 % 1 1 42638
90 % 1 1 40528
70 % 1 1 35709
50 % 1 1 30427
40 % 1 1 26839
30 % 1 1 22756

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.