Sequence Similarity Clusters for the Entities in PDB 1P9M

Entity #1 | Chains: A
Interleukin-6 receptor beta chain protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35153
95 % 2 2 27582
90 % 2 2 26648
70 % 2 2 24155
50 % 2 2 20775
40 % 2 2 18344
30 % 2 2 15602
Entity #2 | Chains: B
Interleukin-6 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 10 4130
95 % 9 11 4264 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.4
PDBFlex
90 % 9 11 4286
70 % 9 11 4209
50 % 9 11 4066
40 % 9 12 3677
30 % 9 12 3416
Entity #3 | Chains: C
Interleukin-6 receptor alpha chain protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59426
95 % 1 1 41444
90 % 1 1 39433
70 % 1 1 34807
50 % 1 1 29712
40 % 1 1 26218
30 % 1 1 22218

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.