1P9D

High-resolution structure of the complex of HHR23A ubiquitin-like domain and the C-terminal ubiquitin-interacting motif of proteasome subunit S5a


Sequence Similarity Clusters for the Entities in PDB 1P9D

Entity #1 | Chains: S
26S proteasome non-ATPase regulatory subunit 4 protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 29227
95 % 3 3 25617
90 % 3 3 24739
70 % 3 3 22396
50 % 3 3 19250
40 % 3 3 17003
30 % 3 3 14238
Entity #2 | Chains: U
UV excision repair protein RAD23 homolog A protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 27798
95 % 2 3 24488
90 % 2 3 23654
70 % 2 4 18872
50 % 2 4 16373
40 % 2 4 14537
30 % 712 727 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2WYQ 1 A UV EXCISION REPAIR PROTEIN RAD23 HOMOLOG A UBIQUITIN-LIKE DOMAIN, RESIDUES 1-82 9606
2 1P9D 2 U UV excision repair protein RAD23 homolog A ubiquitin-like domain 9606
3 1P98 1 A UV excision repair protein RAD23 homolog A Ubiquitin-like domain 9606